Explore a comprehensive bioinformatics tutorial focused on bacterial genome analysis and comparative genomics. Learn to create phylogenetic trees using MUSCLE and PHYML, identify insertion sequence elements in genomes with ISfinder, and visualize genomes using online tools like CGView and Artemis (DNAPlotter). Gain hands-on experience in pangenome analysis of bacterial genomes, identify antimicrobial resistance genes using Abricate, and construct phylogenetic trees based on gene sequences. Master the use of RAxML and iTOL for building phylogenetic trees, and delve into genome assembly using ONT reads with FLYE. This in-depth tutorial provides essential skills for beginners in bioinformatics, covering a wide range of tools and techniques crucial for genomic analysis.
Overview
Syllabus
A bioinformatics tutorial on Bacterial Genome Analysis | Comparative Genomics.
Create phylogenetic trees using MUSCLE and PHYML.
Bioinformatics for Beginners| HOW TO IDENTIFY INSERTION SEQUENCE ELEMENTS IN GENOMES | ISFINDER.
Bioinformatics for Beginners | Course | Genome visualization using the online CGView tool.
Genome Visualization using Artemis (DNAPlotter) | Bioinformatics for Beginners | Course | Tutorial.
Hands-on bioinformatics tutorial on Pangenome analysis of bacterial genomes | Beginners Course.
A bioinformatics tutorial on how to identify Antimicrobial Resistance Genes | Abricate | Beginners.
Build Phylogenetic Trees based on Gene Sequences.
How to Build Phylogenetic Trees using RAxML and iTOL | Bioinformatics for Beginners |Tutorial.
Build Phylogenetic trees with MUSCLE and PhyML.
Genome Assembly Tutorial | ONT reads | FLYE | Bioinformatics for Beginners.
Taught by
Bioinformatics Coach
