Spatial Transcriptomics Courses and Certifications

Labroots

Using MERFISH to Decode Spatially Regulated Disease Drivers in Human Heart and Kidney Disease

Discover how MERFISH technology enables high-resolution gene expression profiling to identify disease drivers in heart and kidney tissues, advancing targeted therapies and precision medicine approaches.

• YouTube
• 59 minutes
• On-Demand
• Free Video

Fred Hutchinson Cancer Center

Researcher's guide to RNA sequencing data

Comprehensive guide to RNA sequencing data analysis, covering bulk RNA-seq, single-cell RNA-seq, and spatial transcriptomics for researchers seeking to process and interpret RNA data effectively.

• Coursera
• 4 hours 20 minutes
• On-Demand
• Free Online Course (Audit)

Paul G. Allen School

Computer Vision to Phenotype Human Diseases Across Physical and Molecular Scales

Innovative computer vision algorithms for disease phenotyping across scales, from video-based heart function assessment to spatial transcriptomics and immune cell dynamics, with focus on robust and human-compatible AI.

• YouTube
• 1 hour
• On-Demand
• Free Video

Imperial College London

Maps, Molecules and Malignancies

Explore the intersection of geography, molecular biology, and cancer research to uncover innovative approaches in understanding and treating malignancies.

• YouTube
• 1 hour 6 minutes
• On-Demand
• Free Video

Georgia Tech Research

AI and Machine Learning in Single Cell Genomics - Day 2

Explore cutting-edge single-cell genomics research, featuring expert talks on spatial transcriptomics, multi-omics, and bioinformatics from leading institutions in Atlanta and across America.

• YouTube
• 7 hours 6 minutes
• On-Demand
• Free Video

Georgia Tech Research

AWSOM24 Conference - AI and Machine Learning in Single Cell Genomics

Explore cutting-edge single-cell genomics research with expert talks on bioinformatics, experimental applications, and translational studies in this comprehensive workshop from leading institutions.

• YouTube
• 7 hours 20 minutes
• On-Demand
• Free Video

Labroots

Illuminating Biology with Spatially Resolved, Single-cell Transcriptomics

Explore spatially resolved, single-cell transcriptomics to understand tissue organization and cellular heterogeneity in biological systems, presented by Vizgen co-founder Jiang He.

• YouTube
• 26 minutes
• On-Demand
• Free Video

Labroots

Practical Considerations and Best Practices for Single Cell and Spatial Transcriptomics

Explore best practices for single cell and spatial transcriptomics, uncovering complex biological systems with high-resolution approaches. Gain insights from an expert in genomics and earn PACE credits.

• YouTube
• 27 minutes
• On-Demand
• Free Video

Labroots

A Spatially-Resolved Transcriptional Atlas of the Murine Dorsal Pontine Tegmentum

Explore a groundbreaking transcriptional atlas of the murine dorsal pontine tegmentum using snRNA-seq and MERFISH, with interactive visualization for real-time data analysis and insights.

• YouTube
• 40 minutes
• On-Demand
• Free Video

Labroots

Fully Automated Workflows for High-Plex Multi-omic Profiling with GeoMx Digital Spatial Profiler

Explore automated workflows for high-plex multi-omic profiling using GeoMx® Digital Spatial Profiler and BOND RX/RXm Research Stainer, enhancing throughput and reproducibility in translational research.

• YouTube
• 38 minutes
• On-Demand
• Free Video

Labroots

Visualizing In Situ Single-Cell Multi-Omic Gene Expression from FFPE Tissue with MERSCOPE

Explore MERSCOPE's advanced capabilities for visualizing single-cell gene expression in FFPE tissue, including protein co-detection and enhanced sample processing for deeper biological insights.

• YouTube
• 38 minutes
• On-Demand
• Free Video

Computational Genomics Summer Institute CGSI

Spatial Modeling of Single-Cell Data Using Deep Learning

Explore deep learning approaches for spatial modeling of single-cell data, focusing on Hi-C reads imputation and transcriptomic data prediction through graph-based methodologies.

• YouTube
• 30 minutes
• On-Demand
• Free Video

Stanford Department of Medicine

Leveraging Advancements in Genomics to Prevent Gastric Cancer

Explore genomic advancements in gastric cancer prevention, focusing on integrative cellular genomics, spatial transcriptomics, and gene mapping techniques for metaplasia and dysplasia.

• YouTube
• 15 minutes
• On-Demand
• Free Video

Computational Genomics Summer Institute CGSI

Models and Methods for Spatial Transcriptomics - CGSI 2023

Explore models and methods for spatial transcriptomics, focusing on alignment, integration, and modeling of gene expression variation in spatially resolved data.

• YouTube
• 41 minutes
• On-Demand
• Free Video

Computational Genomics Summer Institute CGSI

Multiscale Metrics for Comparing Spatial Transcriptomics Datasets

Explore multiscale metrics for comparing spatial transcriptomics datasets, enhancing your understanding of advanced genomic analysis techniques.

• YouTube
• 46 minutes
• On-Demand
• Free Video