Spatial Transcriptomics Courses and Certifications

Fred Hutchinson Cancer Center

Researcher's guide to RNA sequencing data

Comprehensive guide to RNA sequencing data analysis, covering bulk RNA-seq, single-cell RNA-seq, and spatial transcriptomics for researchers seeking to process and interpret RNA data effectively.

• Coursera
• 4 hours 20 minutes
• On-Demand
• Free Online Course (Audit)

Paul G. Allen School

Computer Vision to Phenotype Human Diseases Across Physical and Molecular Scales

Innovative computer vision algorithms for disease phenotyping across scales, from video-based heart function assessment to spatial transcriptomics and immune cell dynamics, with focus on robust and human-compatible AI.

• YouTube
• 1 hour
• On-Demand
• Free Video

Stanford Department of Medicine

Leveraging Advancements in Genomics to Prevent Gastric Cancer

Explore genomic advancements in gastric cancer prevention, focusing on integrative cellular genomics, spatial transcriptomics, and gene mapping techniques for metaplasia and dysplasia.

• YouTube
• 15 minutes
• On-Demand
• Free Video

Georgia Tech Research

AI and Machine Learning in Single Cell Genomics - Day 2

Explore cutting-edge single-cell genomics research, featuring expert talks on spatial transcriptomics, multi-omics, and bioinformatics from leading institutions in Atlanta and across America.

• YouTube
• 7 hours 6 minutes
• On-Demand
• Free Video

Georgia Tech Research

AWSOM24 Conference - AI and Machine Learning in Single Cell Genomics

Explore cutting-edge single-cell genomics research with expert talks on bioinformatics, experimental applications, and translational studies in this comprehensive workshop from leading institutions.

• YouTube
• 7 hours 20 minutes
• On-Demand
• Free Video

Computational Genomics Summer Institute CGSI

Models and Methods for Spatial Transcriptomics - CGSI 2023

Explore models and methods for spatial transcriptomics, focusing on alignment, integration, and modeling of gene expression variation in spatially resolved data.

• YouTube
• 41 minutes
• On-Demand
• Free Video

Computational Genomics Summer Institute CGSI

Alignment, Integration, and Modeling of Spatial Transcriptomics Data

Explore alignment, integration, and modeling techniques for spatial transcriptomics data, focusing on innovative approaches to analyze gene expression patterns in tissue samples.

• YouTube
• 43 minutes
• On-Demand
• Free Video

Computational Genomics Summer Institute CGSI

Multiscale Metrics for Comparing Spatial Transcriptomics Datasets

Explore multiscale metrics for comparing spatial transcriptomics datasets, enhancing your understanding of advanced genomic analysis techniques.

• YouTube
• 46 minutes
• On-Demand
• Free Video

Imperial College London

Maps, Molecules and Malignancies

Explore the intersection of geography, molecular biology, and cancer research to uncover innovative approaches in understanding and treating malignancies.

• YouTube
• 1 hour 6 minutes
• On-Demand
• Free Video

Labroots

Illuminating Biology with Spatially Resolved, Single-cell Transcriptomics

Explore spatially resolved, single-cell transcriptomics to understand tissue organization and cellular heterogeneity in biological systems, presented by Vizgen co-founder Jiang He.

• YouTube
• 26 minutes
• On-Demand
• Free Video

Broad Institute

Copy Number Alterations in Slide-seq Data - MPG Primer 2023

Explore spatial copy number alteration detection in Slide-seq-like spatial transcriptomics data. Learn basic genetics principles related to human populations and disease.

• YouTube
• 55 minutes
• On-Demand
• Free Video

Broad Institute

Spatial and Single Cell Diversity of Cells and Humans

Explore spatial and single-cell diversity in humans, examining how our surroundings influence cellular and individual variations through cutting-edge genomic research.

• YouTube
• 1 hour 18 minutes
• On-Demand
• Free Video

Houston Methodist DeBakey CV Education

Foundation Application to Link Spatial Transcriptomics to Clinical Images - Research Day

Explore a foundation application linking spatial transcriptomics to clinical images in cardiovascular research, enhancing understanding of molecular mechanisms in heart disease.

• YouTube
• 25 minutes
• On-Demand
• Free Video

Broad Institute

Measuring Gene Expression in Tissues for Autoimmune Disease Detection - Lecture 2

Dive into advanced techniques for measuring gene expression in tissues, focusing on spatial transcriptomics and its application in inflammatory bowel disease diagnosis and cancer detection.

• YouTube
• 10 minutes
• On-Demand
• Free Video

Labroots

A Spatially-Resolved Transcriptional Atlas of the Murine Dorsal Pontine Tegmentum

Explore a groundbreaking transcriptional atlas of the murine dorsal pontine tegmentum using snRNA-seq and MERFISH, with interactive visualization for real-time data analysis and insights.

• YouTube
• 40 minutes
• On-Demand
• Free Video