LiquidBrain Bioinformatics Courses

rRNA Sequencing Analysis and Visualization

Explore microbiome analysis techniques using various tools. Learn OTU clustering, diversity analysis, PCA, AMOVA, tree plotting, and visualization with Galaxy, Krona, and MEGAN6 for comprehensive 16S rRNA sequencing insights.

• YouTube
• 44 minutes
• On-Demand
• Free Video

Cancer Somatic Mutation Analysis - MAFTOOLS R Package

Learn to analyze cancer somatic mutations using MAFtools R package. Covers importing data, visualization techniques, driver detection, survival analysis, and comparing cancer cohorts for comprehensive mutation insights.

• YouTube
• 40 minutes
• On-Demand
• Free Video

Dealing with Missing Data in R

Learn techniques for handling missing data in R, including various imputation methods, using packages like mice, and evaluating algorithm performance with ggplot2.

• YouTube
• 34 minutes
• On-Demand
• Free Video

TCGA Biomarkers Identification Using Machine Learning - Complete Walkthrough

Comprehensive walkthrough on using machine learning to identify TCGA biomarkers, covering data preparation, neural network construction, and gene set enrichment analysis.

• YouTube
• 50 minutes
• On-Demand
• Free Video

Comparing scRNA-Seq - Seurat Integration Analysis

Learn to integrate and compare scRNA-Seq datasets from different conditions using Seurat, covering data import, integration, differential expression analysis, and visualization techniques.

• YouTube
• 26 minutes
• On-Demand
• Free Video

Linear Mixed Model in R with lme

Learn to implement Linear Mixed Models in R using lme(). Understand statistical modeling concepts, fixed and random effects, and interpret results for complex data relationships.

• YouTube
• 26 minutes
• On-Demand
• Free Video

Joining Multiple Heatmaps - ComplexHeatMap Tutorial

Learn to combine multiple heatmaps in R using ComplexHeatmap. Master horizontal and vertical merging, customization, and annotations for effective data visualization in bioinformatics.

• YouTube
• 21 minutes
• On-Demand
• Free Video

Creating a Heatmap in R - ComplexHeatmap Tutorial Part 1

Learn to create intricate heatmaps in R using ComplexHeatmap package. Master setup, color customization, title modification, and data ordering for effective visualization of multidimensional genomic data.

• YouTube
• 26 minutes
• On-Demand
• Free Video

Log2 Fold-Change & DESeq2 Model in a Nutshell

Explore log2 fold-change, DESeq2 model, and differential expression analysis challenges. Learn the theory behind DESeq2 and its practical application in R for bioinformatics research.

• YouTube
• 21 minutes
• On-Demand
• Free Video

Clustering and Markers Identification for ScRNA-Seq - Seurat Package Tutorial

Learn to analyze single-cell RNA-seq data using Seurat package, covering data import, QC, normalization, clustering, and marker identification. Gain insights into cell interactions and create visualizations.

• YouTube
• 23 minutes
• On-Demand
• Free Video

RNASeq Analysis - Differential Expressed Genes from FastQ

Comprehensive guide to RNASeq analysis using open-source tools, covering FastQ to DEG identification with Rsubread and DESeq2. Includes step-by-step instructions and practical tips for bioinformatics researchers.

• YouTube
• 30 minutes
• On-Demand
• Free Video

Survival Analysis on Cancer Data - RStudio Tutorial

Aprenda análise de sobrevivência em dados de câncer usando R. Tutorial prático sobre pipeline de análise, uso de dados TCGA, expressão gênica e modelagem preditiva para pesquisa biomédica.

• YouTube
• 35 minutes
• On-Demand
• Free Video

Deep Learning in Bioinformatics - Recent Advancement

Explore recent advancements in deep learning for bioinformatics, covering BTINET, autoencoders, and deep belief networks. Gain insights into cutting-edge applications in genomics, drug discovery, and disease prediction.

• YouTube
• 20 minutes
• On-Demand
• Free Video

Running Basic Statistical Analysis in R

Learn to perform essential statistical analyses in R, including correlation, linear modeling, t-tests, and heatmaps. Ideal for beginners seeking to leverage R's powerful command-line interface for data analysis.

• YouTube
• 23 minutes
• On-Demand
• Free Video

Batch Create Reports with App Scripts

Learn to automate report generation in Google Sheets using Apps Script. Create tables, graphs, and text replacements without add-ons, streamlining data processing from raw CDC EU information.

• YouTube
• 39 minutes
• On-Demand
• Free Video