Computational Genomics Summer Institute CGSI Courses

Reliable Machine Learning in Healthcare

Explore reliable machine learning techniques for healthcare applications, focusing on survival models, dependent censoring, and covariate shift detection to enhance medical decision-making.

• YouTube
• 28 minutes
• On-Demand
• Free Video

Combining Biobanks and Cohort Studies - The Best of Both Worlds

Explore the integration of biobanks and cohort studies to enhance genetic research and improve understanding of complex diseases.

• YouTube
• 37 minutes
• On-Demand
• Free Video

Mixed Models in Genomic Analyses and Imaging Studies

Explore mixed models in genomics and imaging, focusing on efficient set tests, Gaussian process priors, gene-environment interactions, and neural networks for histologic feature quantification.

• YouTube
• 36 minutes
• On-Demand
• Free Video

Large Language Models for Computational Biology - A Primer

Explore large language models in computational biology, covering transformers, pretraining, and applications in genomics and single-cell analysis.

• YouTube
• 49 minutes
• On-Demand
• Free Video

Harnessing Genome Dynamics for Phylogenetic Reconstruction

Explore advanced phylogenetic reconstruction techniques using genome dynamics, including horizontal gene transfer, gene content, and microsynteny-based approaches for prokaryotes and angiosperms.

• YouTube
• 56 minutes
• On-Demand
• Free Video

The Poisson Random Field Model in Population Genetics

Explore the Poisson Random Field model's applications in population genetics, gaining insights into its theoretical foundations and practical implications.

• YouTube
• 47 minutes
• On-Demand
• Free Video

Multiscale Metrics for Comparing Spatial Transcriptomics Datasets

Explore multiscale metrics for comparing spatial transcriptomics datasets, enhancing your understanding of advanced genomic analysis techniques.

• YouTube
• 46 minutes
• On-Demand
• Free Video

Applications of Deep Learning to Genomics and Digital Pathology

Explore deep learning applications in genomics and digital pathology, focusing on cutting-edge research and practical implementations in healthcare.

• YouTube
• 41 minutes
• On-Demand
• Free Video

Machine Learning for Biobank-Scale Genomic Data - CGSI 2022

Explore machine learning techniques for analyzing large-scale biobank data, focusing on genetic architecture, variance components, and interactions in complex traits. Gain insights from UK Biobank applications.

• YouTube
• 53 minutes
• On-Demand
• Free Video

A Tutorial on Computational Methods for Modeling and Analyzing Epigenomic Data

Explore computational methods for modeling and analyzing epigenomic data, covering ChromHMM, multivariate Hidden Markov Models, and integrating multiple chromatin markers across cell types.

• YouTube
• 45 minutes
• On-Demand
• Free Video

Bridging ML Models with Medical Insights for Learning, Inference, and Model Explanation in Radiology

Explore ML models bridging medical insights for radiology applications. Learn about self-supervised representation, progressive exaggeration, contrastive learning, causal analysis, and association tests in medical imaging.

• YouTube
• 50 minutes
• On-Demand
• Free Video

Harnessing Data Geometry for Biomedical Insights

Explore data geometry techniques for biomedical insights, covering manifolds, diffusion operators, and spectral clustering in stem cell development and density estimation.

• YouTube
• 49 minutes
• On-Demand
• Free Video

Personalized Genomic Medicine Using Large-Scale Biobanks Linked with Medical Records

Explore personalized genomic medicine using large-scale biobanks and medical records. Learn about leveraging genomic diversity for discovery and promoting precision health research in diverse populations.

• YouTube
• 53 minutes
• On-Demand
• Free Video

Lessons from the Largest Genome-Wide Association Study of Human Height

Explore insights from the largest genome-wide association study on human height, examining genetic variants, heritability, and the impact of rare variations on this complex trait.

• YouTube
• 38 minutes
• On-Demand
• Free Video

Applying Polygenic Scores at Biobank Scale - CGSI 2022

Explore applying polygenic scores at biobank scale, examining reporting standards, reproducibility, health disparities, and clinical applications in genomic risk prediction.

• YouTube
• 43 minutes
• On-Demand
• Free Video