Computational Genomics Summer Institute CGSI Courses

Applications of Conformal Prediction in Medicine

Explore applications of conformal prediction in medicine, focusing on predictive inference for individual treatment effects and self-consistent conformal prediction techniques.

• YouTube
• 27 minutes
• On-Demand
• Free Video

Lessons from the Largest Genome-Wide Association Study of Human Height

Explore insights from the largest genome-wide association study on human height, examining genetic variants, heritability, and the impact of rare variations on this complex trait.

• YouTube
• 38 minutes
• On-Demand
• Free Video

Applying Polygenic Scores at Biobank Scale - CGSI 2022

Explore applying polygenic scores at biobank scale, examining reporting standards, reproducibility, health disparities, and clinical applications in genomic risk prediction.

• YouTube
• 43 minutes
• On-Demand
• Free Video

Population Genetics in an Era of Genomic Health

Explore population genetics' role in genomic health, focusing on electronic health records, personalized medicine, and genetic disease identification in specific populations.

• YouTube
• 49 minutes
• On-Demand
• Free Video

Computational Methods to Quantify Lethal Cancer Evolution

Explore computational methods for quantifying lethal cancer evolution. Gain insights into driver mutations, evolutionary history, and genomic correlates of prostate cancer's epigenetic landscape.

• YouTube
• 44 minutes
• On-Demand
• Free Video

Interpretability and Out-of-Distribution Generalization in Deep Predictive Models

Explore interpretability and out-of-distribution generalization in deep predictive models, focusing on nuisance-induced spurious correlations and real-time Shapley value estimation techniques.

• YouTube
• 41 minutes
• On-Demand
• Free Video

Inference of Gene Regulatory Networks from Bulk and Single Cell Omic Datasets

Explore gene regulatory network inference techniques using bulk and single-cell omic datasets. Learn about integrative approaches, predictive models, and applications in cellular reprogramming and single-cell genomics.

• YouTube
• 42 minutes
• On-Demand
• Free Video

Overview of Rare Variant Analysis in Whole Genome Sequencing Association Studies

Explore rare variant analysis techniques for whole genome sequencing studies. Learn statistical methods, study designs, and powerful tools for uncovering genetic associations in large-scale genomic data.

• YouTube
• 39 minutes
• On-Demand
• Free Video

Inference Methods for High-Throughput CRISPR Screens - CGSI 2022

Explore inference methods for high-throughput CRISPR screens, focusing on regulatory gene discovery in human T cells and the architecture of immune networks.

• YouTube
• 46 minutes
• On-Demand
• Free Video

How Genetics Can Help Untangle Institutionalized Health Inequity

Explore how genetic research can address health inequities, focusing on case studies involving racial disparities in medical diagnoses and treatment decisions.

• YouTube
• 42 minutes
• On-Demand
• Free Video

Disease Trajectories of Severe Mental Illness

Explore geospatial analysis of severe mental illness, uncovering distinct hotspots and disease trajectories through computational genomics techniques.

• YouTube
• 48 minutes
• On-Demand
• Free Video

Statistical Rigor in Genomics Data Science

Explore statistical rigor in genomics data science, focusing on differential expression methods, p-value calibration, and high-throughput data analysis techniques for improved accuracy in genomic research.

• YouTube
• 44 minutes
• On-Demand
• Free Video

How to Perform In Silico Clinical Trials Using EHR

Learn to conduct in silico clinical trials using electronic health records, exploring innovative approaches to evaluate oncology trial eligibility criteria with real-world data and AI.

• YouTube
• 46 minutes
• On-Demand
• Free Video

Integrating Multiple Omic Data to Improve Mechanistic Understanding and Prediction

Explore integrating multiple omic data to enhance mechanistic understanding and prediction in genomics. Learn techniques for improving data interpretation and predictive modeling in computational biology.

• YouTube
• 39 minutes
• On-Demand
• Free Video

EHR Data Quality: Why You Should Worry and What You Can Do About It

Explore EHR data quality concerns and strategies for improvement. Learn to assess, validate, and enhance electronic health record data for more reliable research and clinical applications.

• YouTube
• 40 minutes
• On-Demand
• Free Video