Learn how to use the Structure software for analyzing population admixture in this 25-minute tutorial from Genomics Boot Camp. Discover where to obtain the program, how to prepare single nucleotide polymorphism (SNP) data using PLINK, and the steps to analyze admixture in a population. Follow along with an example using 31 goat genotypes, each with 48K SNPs. Explore preliminary steps, data preparation, project setup within Structure, running an analysis, and visualizing results. Access the accompanying R code for further reference. Perfect for researchers and students in genomics and population genetics looking to enhance their analytical skills.
Overview
Syllabus
- Preliminary steps, program website, and data
- Data preparation
- Set up a project within Structure
- Run a Structure analysis
- Results and their visualization
Taught by
Genomics Boot Camp
Related Courses
-
Next Generation Sequencing Technologies : Data Analysis and Applications
-
Genomic Admixture - Introduction to Genomics Theory
-
Genome-Wide Association Studies - Introduction to Genomics Theory
-
VarLD- Linkage Disequilibrium Based Selection Signatures - A Comprehensive Tutorial
-
SNP Chips - Introduction to Genomics Theory - Genomics 101
-
Selection Signatures - Introduction to Genomics Theory - Genomics 101
