Molecular Docking and Virtual Screening with AutoDock VINA - Bioinformatics Tutorial
Bioinformatics With BB via YouTube
Overview
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Learn molecular docking techniques using AutoDock VINA for virtual screening in this comprehensive bioinformatics tutorial. Explore the process of identifying lead compounds from large libraries of small molecules through virtual docking into target binding sites. Understand the principles of conformational space exploration, scoring functions, and free energy calculations in ligand-protein interactions. Discover how to post-process and filter docking results to select promising compounds for experimental assays. Gain hands-on experience with tools like MGL Tools, AutoDock Vina, OpenBabel, and Perl scripting. Delve into the advantages of AutoDock Vina over AutoDock 4 for improved binding mode prediction accuracy. Access provided resources, including software links and relevant scientific literature, to enhance your understanding of molecular docking in drug discovery and bioinformatics research.
Syllabus
Introduction
Advantages
Prerequisites
Files needed
Example
Binding Location
Installation
Perl Installation
Taught by
Bioinformatics With BB