Topological Data Analysis for Quantifying Plant Morphology

Topological Data Analysis for Quantifying Plant Morphology

Applied Algebraic Topology Network via YouTube Direct link

Hierarchical clustering

9 of 12

9 of 12

Hierarchical clustering

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Topological Data Analysis for Quantifying Plant Morphology

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  1. 1 Intro
  2. 2 Plant morphology
  3. 3 Main goal of TDA
  4. 4 Barley is one of the world's most ancient crops Remains the world's 4th most important grain crop behind rice, wheat, and corn
  5. 5 Experimental design
  6. 6 Image Processing
  7. 7 Traditional measures
  8. 8 Euler Characteristic Curve
  9. 9 Hierarchical clustering
  10. 10 PCA suggests a slight asymmetry
  11. 11 Euler Characteristic Transform
  12. 12 Computing ECT of seeds

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