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Intro
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Topological Data Analysis for Quantifying Plant Morphology
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- 1 Intro
- 2 Plant morphology
- 3 Main goal of TDA
- 4 Barley is one of the world's most ancient crops Remains the world's 4th most important grain crop behind rice, wheat, and corn
- 5 Experimental design
- 6 Image Processing
- 7 Traditional measures
- 8 Euler Characteristic Curve
- 9 Hierarchical clustering
- 10 PCA suggests a slight asymmetry
- 11 Euler Characteristic Transform
- 12 Computing ECT of seeds