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- Diffusion models on protein backbones
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Classroom Contents
Diffusion Probabilistic Modeling of Protein Backbones in 3D for Motif-Scaffolding
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- 1 - Intro
- 2 - Computational protein design workflow
- 3 - Diffusion models on protein backbones
- 4 - Forward diffusion and reverse denoising
- 5 - Why do diffusion models work?
- 6 - Why do diffusion for proteins?
- 7 - Model details
- 8 - Unconditional sampling
- 9 - Model limitations and failure modes
- 10 - Sampling SMCDiff
- 11 - Motif-scaffolding case studies and failure case
- 12 - Related work and conclusion
- 13 - Q+A
