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Bioinformatics Tutorial: Count the number of variants per chromosome in a VCF file using bcftools
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Classroom Contents
VCF File Manipulation
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- 1 How to read VCF files using bcftools tutorial | Bioinformatics for Beginners | Course
- 2 How to read VCF files using bcftools | indexing VCFs
- 3 Linux for Bioinformatics | How to count the number variants in a VCF file | Beginners Course
- 4 How to read VCF files using bcftools | Extract and view chromosome names
- 5 Rename chromosomes in a VCF file using bcftools
- 6 Variant Calling using Snippy | Microbial Bioinformatics | Bioinformatics for Beginners | Course
- 7 BCFTOOLS tutorial on how to count the number of snps and indels in a vcf file | Bioinformatics
- 8 Extract sample ids from vcf files using bcftools | Bioinformatics Tutorial
- 9 Variant Calling using BCFTOOLS | BCFTOOLS Tutorial | Bioinformatics for Beginners | Course
- 10 Bioinformatics Tutorial: Count the number of variants per chromosome in a VCF file using bcftools
- 11 Bioinformatics Tutorial | Split a VCF file into snps and indels using bcftools- full tutorial
- 12 Split or Subset VCF files based on Sample IDs using bcftools
