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STAT115

STAT115

Xiaole Shirley Liu via YouTube Direct link

2019 STAT115 Lect15.2 Association Studies

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2019 STAT115 Lect15.2 Association Studies

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STAT115

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  1. 1 2019 STAT115 Lect2.1 Microarrays
  2. 2 2019 STAT115 Lect2.2 Quantile Normalization
  3. 3 2019 STAT115 Lect2.3 RMA
  4. 4 2019 STAT115 Lect2.4 RMA Demo
  5. 5 2019 STAT115 Lect4.1 Hierarchical Clustering
  6. 6 2019 STAT115 Lect4.2 K-means Clustering
  7. 7 2019 STAT115 Lect4.3 Batch Effect Correction
  8. 8 2019 STAT115 Lect4.4 Gene Ontology
  9. 9 2019 STAT115 Lect4.5 Gene Set Enrichment Analyses
  10. 10 2019 STAT115 Lect5.1 Unsupervised Learning
  11. 11 2019 STAT115 Lect5.2 Principal Component Analysis
  12. 12 2019 STAT115 Lect5.3 Logistic Regression
  13. 13 2019 STAT115 Lect5.4 Supervised Learning
  14. 14 2019 STAT115 Lect6.1 Sequencing
  15. 15 2019 STAT115 Lect6.2 FASTQC
  16. 16 2019 STAT115 Lect6.3 Blast and Suffix Tree / Array
  17. 17 2019 STAT115 Lect6.4 Burrows-Wheeler Alignment
  18. 18 2019 STAT115 Lect6.5 SAM, BAM, and BED Files
  19. 19 2019 STAT115 Lect7.1 Intro to RNA-seq
  20. 20 2019 STAT115 Lect7.2 RNA-seq QC
  21. 21 2019 STAT115 Lect7.3 RNA-seq Expression Index
  22. 22 2019 STAT115 Lect7.4 DESeq2
  23. 23 2019 STAT115 Lect8.1 Intro to scRNA-seq
  24. 24 2019 STAT115 Lect8.2 QC and Visualize scRNA-seq
  25. 25 2019 STAT115 Lect8.3 Cluster and Annotate scRNA-seq
  26. 26 2019 STAT115 Lect8.4 Differential Expression on scRNA-seq
  27. 27 2019 STAT115 Lect9.1 scRNA-seq Continued
  28. 28 2019 STAT115 Lect9.2 Gene Expression Module Summary
  29. 29 2019 STAT115 Lect9.3 Expression Analyses Case Studies
  30. 30 2019 STAT115 Lect10.1 Transcription regulation
  31. 31 2019 STAT115 Lect10.2 Motif Finding Using Expectation Maximization
  32. 32 2019 STAT115 Lect10.4 Gibbs Sampler Intuitions
  33. 33 STAT115 Chapter 10.5 Motif Conservation and Modules
  34. 34 2019 STAT115 Lect11.1 ChIP-seq
  35. 35 2019 STAT115 Lect11.2 ChIP-seq Peak Calling and QC
  36. 36 2019 STAT115 Lect11.3 ChIP-seq Motif Finding and Collaborating TFs
  37. 37 2019 STAT115 Lect11.4 ChIP-seq Target Identification
  38. 38 2019 STAT115 Lect12.1 Intro to Epigenetics
  39. 39 2019 STAT115 Lect12.2 DNA Methylation
  40. 40 2019 STAT115 Lect12.3 Analyses of DNA Methylome
  41. 41 2019 STAT115 Lect12.4 Nucleosome Positioning
  42. 42 2019 STAT115 Lect14.1 Chromatin Interaction HiC
  43. 43 2019 STAT115 Lect14.2 3D Genome Structure
  44. 44 2019 STAT115 Lect14.3 3D Genome Dynamics
  45. 45 2019 STAT115 Lect14.4 Gene Regulatory Network
  46. 46 2019 STAT115 Lect15.1 SNPs, LD and Haplotypes
  47. 47 2019 STAT115 Lect15.2 Association Studies
  48. 48 2019 STAT115 Lect15.3 Issues on GWAS Studies
  49. 49 2019 STAT115 Lect15.4 eQTL Analyses
  50. 50 2019 STAT115 Lect16.1 EWAS Annotate RSNPs
  51. 51 2019 STAT115 Lect16.2 Module II Summary
  52. 52 2019 STAT115 Lect16.3 Gene Regulation Case Studies
  53. 53 2019 STAT115 Lect17.1 Intro to Hidden Markov Model
  54. 54 2019 STAT115 Lect17.2 HMM Forward and Backward Procedures
  55. 55 2019 STAT115 Lect17.3 HMM Viterbi Algorithm
  56. 56 2019 STAT115 Lect18.1 Overview of Cancer Genetics
  57. 57 2019 STAT115 Lect18.2 Tumor Mutation Calling
  58. 58 2019 STAT115 Lect18.3 Annotating Tumor Mutations
  59. 59 2019 STAT115 Lect18.4 Test Driver Mutations
  60. 60 2019 STAT115 Lect19.1 Cancer Subtyping
  61. 61 2019 STAT115 Lect19.1 Cancer Subtyping
  62. 62 2019 STAT115 Lect19.2 Basic Survival Analysis
  63. 63 2019 STAT115 Lect19.3 Cancer Mutation Types and Distributions
  64. 64 2019 STAT115 Lect19.4 Cancer Genomics Resources
  65. 65 2019 STAT115 Lect20.1 Cancer Targeted Therapy
  66. 66 2019 STAT115 Lect20.2 Cancer Drug Resistance
  67. 67 2019 STAT115 Lect20.3 Overcome Drug Resistance
  68. 68 2019 STAT115 Lect20.4 Synthetic Lethality
  69. 69 2019 STAT115 Lect21.1 Introduction of Cancer Immunotherapy
  70. 70 2019 STAT115 Lect21.2 Neoantigen Presentation
  71. 71 2019 STAT115 Lect21.3 Tumor Immune Infiltration
  72. 72 2019 STAT115 Lect21.4 Tumor Immune Repertoires
  73. 73 2019 STAT115 Lect22.1 Tumor Immune Cell Activation
  74. 74 2019 STAT115 Lect22.3 CRISPR Screens
  75. 75 2019 STAT115 Lect23.1 CRISPR Screen Analyses
  76. 76 2019 STAT115 Lect23.2 Cancer Epigenetics and CIMP
  77. 77 2019 STAT115 Lect23.3 HDAC and 5-AZA in Cancer
  78. 78 2019 STAT115 Lect23.4 CRISPR Screen and Epigenetic Regulators of Cancer Drug Response
  79. 79 2019 STAT115 Lect23.5 Personalized Combination Cancer Therapy
  80. 80 2019 STAT115 Lect24.1 Module III Review
  81. 81 2019 STAT115 Lect24.2 Course Summary
  82. 82 2019 STAT115 Lect24.3 Final Review

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