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- Where to find published RNA-seq data
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Classroom Contents
RNA-seq Tutorial: Differential Gene Expression Analysis with DESeq2
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- 1 - Intro
- 2 - Where to find published RNA-seq data
- 3 - Download data from the Gene Expression Atlas
- 4 - Wrangle the data for DESeq2
- 5 - Spot check the data
- 6 - Run DESeq2
- 7 - More complex design formulas
- 8 - What does the ~ mean?
- 9 - Compare your results to the Gene Expression Atlas
- 10 - Make an MA plot and Volcano plot
- 11 - Make a circos plot
