Protein Representation Learning by Geometric Structure Pretraining

Protein Representation Learning by Geometric Structure Pretraining

Valence Labs via YouTube Direct link

- Self-Prediction Baselines

9 of 13

9 of 13

- Self-Prediction Baselines

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Protein Representation Learning by Geometric Structure Pretraining

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  1. 1 - Intro
  2. 2 - Protein Function Prediction
  3. 3 - GearNet: A Simple, Effective Protein Structure Encoder
  4. 4 - Edge Message Passing
  5. 5 - GearNet-Edge
  6. 6 - Experimental Setup
  7. 7 - Geometric Pretraining
  8. 8 - Contrastive Learning: SimCLR
  9. 9 - Self-Prediction Baselines
  10. 10 - Experimental Setup
  11. 11 - Pretraining on Different Datasets
  12. 12 - Conclusion & Future Work
  13. 13 - Q+A

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