Julia for Biologists - A Perspective on Speed, Abstraction, and Metaprogramming

Julia for Biologists - A Perspective on Speed, Abstraction, and Metaprogramming

The Julia Programming Language via YouTube Direct link

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4 of 21

: Contents

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Julia for Biologists - A Perspective on Speed, Abstraction, and Metaprogramming

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  1. 1 Welcome!
  2. 2 Help us add time stamps for this video! See the description for details.
  3. 3 : Further resources and contact details
  4. 4 : Contents
  5. 5 : Introduction: Tools of a biologist
  6. 6 : Julia enables new biology
  7. 7 : Speed Ex. 1 - Single cell data and network inference
  8. 8 : Speed Ex. 2 - Pharmacology and dynamical systems
  9. 9 : What is abstraction in context of programming language?
  10. 10 : What is abstraction in Julia?
  11. 11 : Why should biologists care about abstraction?
  12. 12 : Abstraction Ex. 1 - Structural Bioinformatics and code reuse
  13. 13 : Abstraction Ex. 2 - Image processing
  14. 14 : Metaprogramming
  15. 15 : Metaprogramming Ex.1 - Biochemical reaction networks
  16. 16 : Metaprogramming Ex.2 - Whole cell modeling
  17. 17 : Summary
  18. 18 : The package ecosystem in Julia for biologists
  19. 19 : More reasons why to use Julia
  20. 20 : Acknowledgements
  21. 21 : Tips from the community

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