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Small Variant Calling and Annotation
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Classroom Contents
High-Throughput Biology - From Sequence to Networks 2017
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- 1 Introduction to High-Throughput Sequencing
- 2 Data Visualization
- 3 Genome Alignment
- 4 Small Variant Calling and Annotation
- 5 Structural Variant Calling
- 6 De Novo Assembly
- 7 Introduction to RNA Sequencing and Analysis
- 8 RNA-Seq Alignment and Visualization
- 9 Expression and Differential Expression
- 10 Isoform Discovery and Alternative Expression
- 11 Introduction to Pathway and Network Analysis
- 12 Finding Over-Represented Pathways
- 13 Cytoscape Inroduction and Enrichment Map
- 14 More Depth on Network and Pathway Analysis
- 15 Gene Function Prediction
- 16 Gene Regulation Network Analysis
