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Computational Systems Biology

Computational Systems Biology

NPTEL-NOC IITM via YouTube Direct link

32 - Reconstruction of Protein Networks

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32 - Reconstruction of Protein Networks

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Computational Systems Biology

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  1. 1 103 - Course Recap
  2. 2 102 - Advanced Topics
  3. 3 101 - Advanced Topics
  4. 4 100 - Advanced Topics
  5. 5 99 - Introduction to Synthetic Biology
  6. 6 98 - Robustness and Evolvability
  7. 7 96 - Robustness in Biological Systems: Trade-offs
  8. 8 97 - Robustness and Evolvability
  9. 9 95 - Robustness in Biological Systems: Organising Principles
  10. 10 94 - Robustness in Biological Systems: Mechanisms
  11. 11 93 - Robustness in Biological Systems
  12. 12 92 - Computational Modelling of Host--Pathogen Interactions
  13. 13 91 - Computational Modelling of Host--Pathogen Interactions
  14. 14 90 - Lab: Modelling Gene Regulatory Networks
  15. 15 89 - Lab: Modelling Gene Regulatory Networks
  16. 16 88 - Modelling Gene Regulatory Networks
  17. 17 87 - Modelling Gene Regulatory Networks
  18. 18 86 - Modelling Gene Regulatory Networks
  19. 19 85 - Lab: $^{13}$C-Metabolic Flux Analysis using Mass Spectrometry
  20. 20 84 - $^{13}$C-Metabolic Flux Analysis using Mass Spectrometry
  21. 21 83 - $^{13}$C-Metabolic Flux Analysis using Mass Spectrometry
  22. 22 82 - $^{13}$C-Metabolic Flux Analysis using Mass Spectrometry
  23. 23 81 - Constraint-based Modelling of Metabolic Networks: Recap
  24. 24 80 - Constraint-based Modelling of Metabolic Networks: Recap
  25. 25 79 - Constraint-based Modelling of Metabolic Networks: Recap
  26. 26 78 - Lab: Gene Deletions
  27. 27 77 - Constraint-based Modelling of Metabolic Networks: Applications
  28. 28 76 - Constraint-based Modelling of Metabolic Networks: Applications
  29. 29 75 -Constraint-based Modelling of Metabolic Networks: Applications
  30. 30 74 - Elementary Modes
  31. 31 73 - Elementary Modes
  32. 32 72 -Integrating Regulatory Information into Constraint-Based Models
  33. 33 71 - Lab: Gene Deletions
  34. 34 70 - Constraint-based Modelling of Metabolic Networks
  35. 35 69 - Perturbations to Metabolic Networks: Synthetic Lethals
  36. 36 68 - Perturbations to Metabolic Networks: Synthetic Lethals
  37. 37 67 - Perturbations to Metabolic Networks: Over-expression
  38. 38 66 - Understanding FBA
  39. 39 65 - Understanding FBA
  40. 40 64 - Lab: COBRA Toolbox
  41. 41 63 - Perturbations to Metabolic Networks: Deletions
  42. 42 62 - Lab: FBA using MATLAB
  43. 43 61 - Other Constraint-Based Approaches
  44. 44 60 - Other Constraint-Based Approaches
  45. 45 59 - Flux Balance Analysis
  46. 46 58 - Flux Balance Analysis
  47. 47 57 - Flux Balance Analysis
  48. 48 56 - Constraint-based Modelling of Metabolic Networks
  49. 49 55 - Guest Lecture: Quantitative Systems Pharmacology
  50. 50 54 - Guest Lecture: Quantitative Systems Pharmacology
  51. 51 53 - Guest Lecture: Quantitative Systems Pharmacology
  52. 52 52 - Guest Lecture: Modelling in Drug Development
  53. 53 51 - Guest Lecture: Modelling in Drug Development
  54. 54 50 - Lab: Parameter Estimation
  55. 55 49 - Dynamic Modelling Recap
  56. 56 48 - PyGMO
  57. 57 47 - Other Evolutionary Algorithms
  58. 58 46 - Genetic Algorithms
  59. 59 45 - Genetic Algorithms
  60. 60 44 - Direct Search Methods
  61. 61 43 - Methods for Parameter Estimation
  62. 62 42 - Parameter Estimation
  63. 63 41 - Parameter Estimation
  64. 64 40 - Parameter Estimation
  65. 65 39 - Lab: Example Biological Model
  66. 66 38 - Lab: Solving ODEs in MATLAB
  67. 67 37 - Introduction to Dynamic Modelling
  68. 68 36 - Introduction to Dynamic Modelling
  69. 69 35 - Introduction to Dynamic Modelling
  70. 70 34 - Reconstruction of Signalling Networks
  71. 71 33 - Reconstruction of Signalling Networks
  72. 72 32 - Reconstruction of Protein Networks
  73. 73 31 - Reconstruction of Gene Regulatory Networks
  74. 74 30 - Lab: Network Models & Perturbations
  75. 75 29 - Lab: Network Models & Perturbations
  76. 76 28 - Network Biology: Recap
  77. 77 27 - Lab: Network Biology
  78. 78 26 - Lab: Cytoscape
  79. 79 25 - Lab: Cytoscape
  80. 80 24 - Network Motifs
  81. 81 23 - Community Detection
  82. 82 22 - Network Perturbations
  83. 83 21 - Biological Networks
  84. 84 20 - Network Models
  85. 85 19 - Network Models
  86. 86 18 - Network Biology
  87. 87 17 - Introduction to Network Biology
  88. 88 16 - Introduction to Network Biology
  89. 89 15 - Introduction to Network Biology
  90. 90 14 - Introduction to Networks
  91. 91 13 - Introduction to Networks
  92. 92 12 - Lab: MATLAB Basics
  93. 93 11 - Lab: MATLAB Basics
  94. 94 10 - Lab: MATLAB Basics
  95. 95 09 - Lab: MATLAB Basics
  96. 96 08 - Representation of Biological Networks
  97. 97 07 - Some Example Models
  98. 98 06 - Fundamentals of Mathematical Modelling
  99. 99 05 - Fundamentals of Mathematical Modelling
  100. 100 04 - Fundamentals of Mathematical Modelling
  101. 101 03 - Introduction to Modelling
  102. 102 02 - Introduction to Modelling
  103. 103 01 - Introduction

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