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Causal Inference in Single-cell Genomics - Machine Learning in Computational Biology
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- 1 Introduction
- 2 Outline
- 3 Causal Inference
- 4 Notations
- 5 Observations
- 6 Assumptions
- 7 Logistic regression
- 8 Randomized control trial
- 9 Inverse probability weighting
- 10 Causal assumptions
- 11 Summary
- 12 Differential Expression Analysis
- 13 Cellular Context
- 14 Biological Covariates
- 15 Singlecell Data
- 16 Pipeline
- 17 Pipeline of Singlecell Analysis
- 18 Singlecell Mixture Model
- 19 T cell study
- 20 Self annotation
