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Introduction to Cancer Genomics
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Classroom Contents
Bioinformatics for Cancer Genomics 2018
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- 1 Introduction to Cancer Genomics
- 2 Ethics of Data Usage and Security
- 3 Cancer Databases
- 4 Mapping Reads to a Reference Genome
- 5 The Fundamentals of Genome Assembly
- 6 Somatic Copy Number Alterations in Cancer
- 7 Gene Expression (RNA-Seq)
- 8 Gene Fusion Discovery
- 9 Sharing and Scaling a VM in the Collaboratory Cloud
- 10 Working Reproducibly in the Cloud
- 11 Big Data Analysis in the Cloud
- 12 Variants to Networks
- 13 Somatic Mutations and Annotations
- 14 Data Integration
- 15 Genes to Pathways
