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Development of algorithms - I
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Classroom Contents
Bioinformatics- Algorithms and Applications
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- 1 Concepts and importance of Bioinformatics
- 2 Complexities in biological systems
- 3 DNA sequence analysis
- 4 Sequence based parameters
- 5 Database
- 6 Database categories
- 7 Protein structure and function
- 8 Protein structure and function II
- 9 Protein sequence databases
- 10 Protein sequence databases II
- 11 Pairwise alignment
- 12 Pairwise alignment II
- 13 Uniprot_Demo
- 14 Sequence alignment
- 15 Sequence alignment II
- 16 Sequence alignment: Online resources
- 17 Sequence alignment: Online resources II
- 18 Conservation score
- 19 Conservation score II
- 20 Blast - Demo
- 21 Phylogenetic trees
- 22 Phylogenetic trees II
- 23 Protein sequence analysis
- 24 Protein sequence analysis II
- 25 Hydrophobicity profiles
- 26 Patterns and PSSM profiles
- 27 Construction of Non-redundant datasets I
- 28 Non-redundant datasets II
- 29 Protein secondary structure
- 30 Secondary structure prediction I
- 31 Secondary structure prediction II
- 32 Secondary structure prediction III
- 33 Protein tertiary structure - I
- 34 Protein tertiary structure - II
- 35 Protein structure analysis - I
- 36 Protein structure analysis - II
- 37 Protein structure analysis - III
- 38 Demo: PDB or Pymol or PDBParam
- 39 Demo: Homology Modelling
- 40 Protein structure analysis - IV
- 41 Protein structure prediction - I
- 42 Protein structure prediction - II
- 43 Protein stability - I
- 44 Protein stability - II
- 45 Stabilizing residues
- 46 Thermodynamic database
- 47 Stability of proteins upon mutations - I
- 48 Stability of proteins upon mutations - II
- 49 Demo: ProTherm
- 50 Protein folding rate - I
- 51 Protein folding rate - II
- 52 Protein interactions - I
- 53 Protein interactions - II
- 54 Computer aided drug design - I
- 55 Computer aided drug design - II
- 56 Virtual screening - I
- 57 Virtual screening - II
- 58 QSAR - I
- 59 QSAR - II
- 60 Demo: Autodock
- 61 awk programming - I
- 62 awk programming - II
- 63 Development of algorithms - I
- 64 Development of algorithms - II
- 65 Applications of bioinformatics - I
- 66 Applications of bioinformatics - II
- 67 Overview - I
- 68 Overview - II
- 69 Demo: Weka
